Plotting¶
marimo supports most major plotting libraries, including Matplotlib, Seaborn, Plotly, Altair, and HoloViews. Just import your plotting library of choice and use it as you normally would.
For Altair and Plotly plots, marimo does something special: use
mo.ui.altair_chart
or
mo.ui.plotly
to connect frontend
selections to Python!
Reactive plots!
marimo supports reactive plots via
mo.ui.altair_chart
and
mo.ui.plotly
! Select and
filter with your mouse, and marimo automatically makes the selected data
available in Python as a Pandas dataframe!
Reactive plots! ⚡¶
Requirements
Reactive plots currently require Altair or Plotly. Install with pip install
altair
or pip install plotly
, depending on which library you are using.
Selections in plotly are limited to scatter plots, treemaps charts, and sunbursts charts, while Altair supports
a larger class of plots for selections.
Altair¶
Use mo.ui.altair_chart
to easily
create interactive, selectable plots: selections you make on the frontend are
automatically made available as Pandas dataframes in Python.
Wrap an Altair chart in mo.ui.altair_chart
to make it reactive: select data on the frontend, access it via the chart's
value
attribute (chart.value
).
Disabling automatic selection¶
marimo automatically adds a default selection based on the mark type, however, you may want to customize the selection behavior of your Altair chart. You can do this by setting chart_selection
and legend_selection
to False
, and using .add_params
directly on your Altair chart.
# Create an interval selection
brush = alt.selection_interval(encodings=["x"])
_chart = (
alt.Chart(traces, height=150)
.mark_line()
.encode(x="index:Q", y="value:Q", color="traces:N")
.add_params(brush) # add the selection to the chart
)
chart = mo.ui.altair_chart(
_chart,
# disable automatic selection
chart_selection=False,
legend_selection=False
)
chart # You can now access chart.value to get the selected data
Reactive plots are just one way that marimo makes your data tangible.
Example¶
import marimo as mo
import altair as alt
import vega_datasets
# Load some data
cars = vega_datasets.data.cars()
# Create an Altair chart
chart = alt.Chart(cars).mark_point().encode(
x='Horsepower', # Encoding along the x-axis
y='Miles_per_Gallon', # Encoding along the y-axis
color='Origin', # Category encoding by color
)
# Make it reactive ⚡
chart = mo.ui.altair_chart(chart)
# In a new cell, display the chart and its data filtered by the selection
mo.vstack([chart, chart.value.head()])
Learning Altair¶
If you're new to Altair, we highly recommend exploring the Altair documentation. Altair provides a declarative, concise, and simple way to create highly interactive and sophisticated plots.
Altair is based on Vega-Lite, an exceptional tool for creating interactive charts that serves as the backbone for marimo's reactive charting capabilities.
Concepts¶
Learn by doing? Skip this section!
This section summarizes the main concepts used by Altair (and Vega-Lite). Feel free to skip this section and return later.
Our choice to use the Vega-Lite specification was driven by its robust data model, which is well-suited for data analysis. Some key concepts are summarized below. (For a more detailed explanation, with examples, we recommend the Basic Statistical Visualization tutorial from Altair.)
- Data Source: This is the information that will be visualized in the chart. It can be provided in various formats such as a dataframe, a list of dictionaries, or a URL pointing to the data source.
- Mark Type: This refers to the visual representation used for each data point on the chart. The options include 'bar', 'dot', 'circle', 'area', and 'line'. Each mark type offers a different way to visualize and interpret the data.
- Encoding: This is the process of mapping various aspects or dimensions of the data to visual characteristics of the marks. Encodings can be of different types:
- Positional Encodings: These are encodings like 'x' and 'y' that determine the position of the marks in the chart.
- Categorical Encodings: These are encodings like 'color' and 'shape' that categorize data points. They are typically represented in a legend for easy reference.
- Transformations: These are operations that can be applied to the data before it is visualized, for example, filtering and aggregation. These transformations allow for more complex and nuanced visualizations.
Automatically interactive.
marimo adds interactivity automatically, based on the mark used and the
encodings. For example, if you use a mark_point
and an x
encoding, marimo
will automatically add a brush selection to the chart. If you add a color
encoding, marimo will add a legend and a click selection.
Automatic Selections¶
By default mo.ui.altair_chart
will make the chart and legend selectable. Depending on the mark type, the
chart will either have a point
or interval
("brush") selection. When using
non-positional encodings (color, size, etc),
mo.ui.altair_chart
will also
make the legend selectable.
Selection configurable through *_selection
params in
mo.ui.altair_chart
. See the API
docs for details.
Note
You may still add your own selection parameters via Altair or Vega-Lite. marimo will not override your selections.
Altair transformations¶
Altair supports a variety of transformations, such as filtering, aggregation, and sorting. These transformations can be used to create more complex and nuanced visualizations. For example, you can use a filter to show only the points that meet a certain condition, or use an aggregation to show the average value of a variable.
In order for marimo's reactive plots to work with transformations, you must install vegafusion
, as this feature uses chart.transformed_data
(which requires version 1.4.0 or greater of the vegafusion
packages).
# These can be installed with pip using:
pip install "vegafusion[embed]>=1.4.0"
# Or with conda using:
conda install -c conda-forge "vegafusion-python-embed>=1.4.0" "vegafusion>=1.4.0"
Plotly¶
mo.ui.plotly only supports scatter plots, treemaps charts, and sunbursts charts
marimo can render any Plotly plot, but mo.ui.plotly
only
supports reactive selections for scatter plots, treemaps charts, and sunbursts charts. If you require other kinds of
selection, consider using mo.ui.altair_chart
.
Use mo.ui.plotly
to create
selectable Plotly plots whose values are sent back to Python on selection.
matplotlib¶
To output a matplotlib plot in a cell's output area, include its Axes
or
Figure
object as the last expression in your notebook. For example:
or
If you want to output the plot in the console area, use plt.show()
or
fig.show()
.
Interactive plots¶
To make matplotlib plots interactive, use mo.mpl.interactive. (Matplotlib plots are not yet reactive.)